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$FREE

Plugin

Biobase Genome Trax Download

The purpose of the Biobase Genome Trax Download plug-in is to provide direct access to Biobase's Genome Trax from CLC Genomics Workbench.

The purpose of the Biobase Genome Trax Download plug-in is to provide direct access to Biobase's Genome Trax from CLC Genomics Workbench.

Unlike the the Annotation plugin that adds information to existing annotations, the download plugin downloads entire tracks for storing, comparing and refining. The download functionality requires the annotation plugin to installed.

All the information below is a few clicks away when you are in CLC Genomics Workbench:

  • 4,400+ regulatory sites from TRANSFAC
  • 90,000+ disease linked mutations from HGMD Professional
  • 152,000+ COSMIC (Catalogue of Somatic Mutations in Cancer) mutations
  • 877,000+ ChIP-Seq fragments with best binding site predictions
  • Disease biomarkers, drug targets, and pathway memberships from PROTEOME
  • Single Nucleotide Polymorphisms from dbSNP and Ensembl which overlap with promoter features and sites of regulation
  • Post Translational Modifications
  • Additional genome features such as microsatellites, transcription start sites (TSSs), and CpG islands

Biobase Genome Trax can also be accessed from CLC Genomics Server using the server version of the plugin.

Guides

Further Reading

Installation

The plugin is easily installed from within the Workbench:

  1. Click Plugins in the Toolbar
  2. Click the tab Download Plugins
  3. Select the plugin you wish to install
  4. Click the Download and Install button

Download from www.clcbio.com

Alternatively, you can download the plugin.

Workbench Download Server Download