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Plugin

Duplicate Mapped Reads Removal

The Duplicate Mapped Reads Removal plugin is designed to remove duplicate reads from mapping data.

The Duplicate Mapped Reads Removal plugin is designed to remove duplicate reads from mapping data.

The purpose of this tool is to efficiently remove duplicate reads from a mapping, when duplicate reads have arisen due to the use of PCR amplification (or other enrichment) during sample preparation. The tool may be used on mappings of single end reads, paired end reads or both.

Guides

Further Reading

Installation

The plugin is easily installed from within the Workbench:

  1. Click Plugins in the Toolbar
  2. Click the tab Download Plugins
  3. Select the plugin you wish to install
  4. Click the Download and Install button

Download from www.clcbio.com

Alternatively, you can download the plugin.

Workbench Download Server Download