Motif search with PROSITE patterns


For proteins, you can enter different protein patterns from the PROSITE database (protein patterns using regular expressions and describing specific amino acid sequences). The PROSITE database contains a great number of patterns and have been used to identify related proteins.

You can perform the analysis on several DNA or several protein sequences at a time. If the analysis is performed on several sequences at a time the method will search for patterns in the sequences and open a new view for each of the sequences.

See Motif search for basic patterns for more information about Motif search.