Workbench integration of the Shannon pipeline for human splicing
Cytognomix has released a splicing mutation pipeline plugin for CLC Genomics Workbench finding and interpreting genomic variants that alter mRNA splicing in human exome, targeted sequencing or complete genome data.
CLC Developer Kit
All software in our platform is fully customizable through plugins, and using our Software Developer Kit, you can create plugins for our workbench product line. The plugin mechanism makes the CLC workbench a very powerful tool, enabling you to create any kind of add-on for database communication or advanced bioinformatics.
Cytognomix genome-scale human splicing mutation analysis
Cytognomix's Shannon pipeline was initially created to address the vexing problem of assessing the many variants of unknown significance
that are detected in cancer genetic testing.
The Shannon human splicing mutation plugin for CLC Genomics Workbench uses a proven approach to predict mRNA splicing abnormalities based on single nucleotide variant data from human sequencing.
- CLC Genomics Workbench
- CLC Main Workbench
- General Information