Application notes on different subjects,
ranging from de novo assembly of
paired-end plant transcriptome data to amplicon analysis of lung cancer.
Application note on tumorspecific variant detection using CLC Genomics Workbench
Application note on somatic variant detection using CLC Genomics Workbench
Application note on analyzing amplicon sequencing data and identifying cancer relevant variants using CLC Genomics Workbench
Application note on Amplicon Analysis using CLC Genomics Workbench
Plant & Animal Genomics
Describing a workflow for identification of cultivar-specific SNVs, and for selecting genes that allow for discrimination between selected cultivars, using CLC Genomics Workbench.
The Blast2GO plugin for CLC Genomics Workbench allows for functional annotation of novel sequence data either from genome assembly or transcriptomics projects
Application note on comparative genomics data analysis, using Illumina exome data from Bos taurus (taurine), Bos indicus (zebu), and Bison bison (bison), analyzed and visualized through Genomics Gateway in CLC Genomics Workbench
Application note on de novo assembly of a plant transcriptome using Illumina paired-end sequencing data from Lactuca serriola (prickly lettuce) in CLC Genomics Workbench
Application note on disease- associated variant detection using CLC Genomics Workbench
Application note on analyzing trio-based next-generation sequencing data using CLC Genomics Workbench